PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.3G229900.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 510aa    MW: 56518.4 Da    PI: 6.268
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.3G229900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.8e-11197226433
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          k err+++NReAAr+sR+RKka++++Le+
  Sevir.3G229900.2.p 197 AKTERRLAQNREAARKSRLRKKAYVQQLET 226
                         699*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-6194270IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312196239IPR004827Basic-leucine zipper domain
PfamPF001701.7E-8197227IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-7198227No hitNo description
SuperFamilySSF579594.58E-7198240No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
PfamPF141442.9E-28278353IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MAQGEESSWW VTSDHGRALP FSQALACGIQ SHAPAARPAN FLELQPSATA YFGELEEALI  60
HGSCTSIDPS MIGRDVDTEC NKTGYLAARP PTLEIFPSWP MSHLQQPYSG NSHSVGSTSE  120
SSSGQNAMPQ AELVSPGSMR ADSGQQQEVL MVTVDDYNYE QGLGVAATTA PIFQQHTESQ  180
DKRKQGSTRK DGKLLDAKTE RRLAQNREAA RKSRLRKKAY VQQLETSRIR LQQIEQELQG  240
ARSQGLFPGG GSASGDMNSG ALMFDMEYAR WLEDDSKHMT QLQGILQAQN IDANLGTIVE  300
ECMRHYDELF HLRAMLARSD VFHLMTGLWA TTAERCFLWM GGFRPSEILK MLIPQLDPLT  360
EQQLLGMCNL QRSSEQTEEA LVQGLQQLHK SLADAVGASP LSDGANVANY TALMALALDR  420
LDTLESFYRQ ADNLRQQTLH HMRRLLTTRQ TARCFLSIGE YHRRLRALSS VWASRPLESF  480
VAAAENVSPT GTAEQAIHHP YHQSQFSGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961926.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotO241601e-110TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotP239231e-111HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-110HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK3Z6D70.0K3Z6D7_SETIT; Uncharacterized protein
STRINGSi022106m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-129bZIP family protein